{"id":347,"date":"2024-09-17T21:57:04","date_gmt":"2024-09-17T21:57:04","guid":{"rendered":"https:\/\/leech.caltech.edu\/wp\/?page_id=347"},"modified":"2024-09-19T16:03:42","modified_gmt":"2024-09-19T16:03:42","slug":"publications","status":"publish","type":"page","link":"https:\/\/leech.caltech.edu\/cntl\/?page_id=347","title":{"rendered":"Publications"},"content":{"rendered":"\n<div class=\"wp-block-group cntl-top-line has-global-padding is-layout-constrained wp-container-core-group-is-layout-2 wp-block-group-is-layout-constrained\" style=\"padding-right:0;padding-left:0\">\n<div class=\"wp-block-group has-border-color has-global-padding is-layout-constrained wp-block-group-is-layout-constrained\" style=\"border-color:#df8813;border-radius:4px\"><\/div>\n<\/div>\n\n\n\n<p><em>This is a partial list of papers that used instrumentation created by the Neurotech Lab. At the moment, only those papers are listed on which Dr. Wagenaar was a co-author. If you would like your paper listed here, send me an <a href=\"mailto:daw@caltech.edu\">email<\/a>.<\/em><\/p>\n\n\n\n<p>Z. Wang, R. Zhao, D. A. Wagenaar, W. Kang, C. Lee, W. Schmidt, A. Pammar, E. Zhu, G. C. L. Wong, R. Liang, T. Hsiai, L. Gao, 2024. <em>bioRxiv<\/em>, 10.1101\/2024.03.23.586416. <a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2024.03.23.586416v1\">Full text<\/a> \u2022 <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/38585760\/\">PubMed<\/a><\/p>\n\n\n\n<p>E. M. Trautmann, J. K. Hesse, G. M. Stine, R. Xia, S. Zhu, D. J. O\u2019Shea, B. Karsh, J. Colonell, F. F. Lanfranchi, S. Vyas, A. Zimnik, N. A. Steinmann, D. A. Wagenaar, A. Andrei, C. M. Lopez, J. O\u2019Callaghan, J. Putzeys, B. C. Raducanu, M. Welkenhuysen, M. Churchland, T. Moore, M. Shadlen, K. Shenoy, D. Tsao, B. Dutta, T. Harris, 2023. Large-scale high-density brain-wide neural recording in nonhuman primates. <em>bioRxiv<\/em>, 10.1101\/2023.02.01.526664. <a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2023.02.01.526664v3\">Full text<\/a> \u2022 <a href=\"https:\/\/pubmed.ncbi.nlm.nih.gov\/37205406\/\">PubMed<\/a><\/p>\n\n\n\n<p>J. R. Cho, X. Chen, A. Kahan, J. E. Robinson, D. A. Wagenaar, and V. Gradinaru, 2021. Dorsal raphe dopamine neurons signal motivational salience dependent on internal state, expectation, and behavioral context. <em>J Neurosci<\/em> <strong>41<\/strong>, 2645\u20132655. <a href=\"https:\/\/www.danielwagenaar.net\/papers\/21-CCKR.pdf\">Full text (pdf)<\/a> \u2022 <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=retrieve&amp;db=pubmed&amp;list_uids=33563725&amp;dopt=Abstract\">PubMed<\/a> \u2022 <a href=\"http:\/\/scholar.google.com\/scholar?as_q=Dorsal+raphe+dopamine+neurons+signal+motivational+salience+dependent+on+internal+state,+expectation,+and+behavioral+context&amp;as_occt=title&amp;as_sauthors=%22Wagenaar%22\">GScholar<\/a><\/p>\n\n\n\n<p>A. Kahan, A. Greenbaum, M. J. Jang, J. E. Robinson, J. R. Cho, X. Chen, P. Kassraian, D. A. Wagenaar, and V. Gradinaru, 2021. \u201cLight-guided sectioning\u201d for precise localization and 3D visualization of in situ optical implants. <em>Cell Reports<\/em> <strong>36<\/strong>, 109744. <a href=\"https:\/\/www.danielwagenaar.net\/papers\/21-KGJR.pdf\">Full text (pdf)<\/a> \u2022 <a href=\"http:\/\/scholar.google.com\/scholar?as_q=\u201cLight-guided+sectioning\u201d+for+precise+localization+and+3D+visualization+of+in+situ+optical+implants&amp;as_occt=title&amp;as_sauthors=%22Wagenaar%22\">GScholar<\/a><\/p>\n\n\n\n<p>Y. He, J. Shi, M. A. Pleitez, K. Maslov, D. A. Wagenaar, and L. V. Wang, 2020. Label-free imaging of lipid-rich biological tissues by mid-infrared photoacoustic microscopy. <em>J Biomed Opt<\/em> <strong>25<\/strong>, 106506. <a href=\"https:\/\/www.danielwagenaar.net\/papers\/20-HSPM.pdf\">Full text (pdf)<\/a> \u2022 <a href=\"http:\/\/scholar.google.com\/scholar?as_q=Label-free+imaging+of+lipid-rich+biological+tissues+by+mid-infrared+photoacoustic+microscopy&amp;as_occt=title&amp;as_sauthors=%22Wagenaar%22\">GScholar<\/a><\/p>\n\n\n\n<p>A. Kennedy, P. S. Kunwar, L. Y. Li, S. Stagkourakis, D. A. Wagenaar, and D. J. Anderson, 2020. Stimulus-specific hypothalamic encoding of a persistent defensive state. <em>Nature<\/em> <strong>586<\/strong>, 730\u2013734. <a href=\"https:\/\/www.danielwagenaar.net\/papers\/20-KKLS-preprint.pdf\">Preprint (pdf)<\/a> \u2022 <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=retrieve&amp;db=pubmed&amp;list_uids=32939094&amp;dopt=Abstract\">PubMed<\/a> \u2022 <a href=\"http:\/\/scholar.google.com\/scholar?as_q=Stimulus-specific+hypothalamic+encoding+of+a+persistent+defensive+state&amp;as_occt=title&amp;as_sauthors=%22Wagenaar%22\">GScholar<\/a><\/p>\n\n\n\n<p>E. Arbabi, J. Li, R. J. Hutchins, S. M. Kamali, A. Arbabi, Y. Horie, P. Van Dorpe, V. Gradinaru, D. A. Wagenaar, and A. Faraon, 2018. Two-photon microscopy with a double-wavelength metasurface objective lens. <em>Nano Lett<\/em> <strong>18<\/strong>, 4943\u20134948. <a href=\"http:\/\/www.ncbi.nlm.nih.gov\/entrez\/query.fcgi?cmd=retrieve&amp;db=pubmed&amp;list_uids=30016110&amp;dopt=Abstract\">PubMed<\/a> \u2022 <a href=\"http:\/\/scholar.google.com\/scholar?as_q=Two-photon+microscopy+with+a+double-wavelength+metasurface+objective+lens&amp;as_occt=title&amp;as_sauthors=%22Wagenaar%22\">GScholar<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>This is a partial list of papers that used instrumentation created by the Neurotech Lab. At the moment, only those papers are listed on which Dr. Wagenaar was a co-author. If you would like your paper listed here, send me an email. Z. Wang, R. Zhao, D. A. Wagenaar, W. Kang, C. Lee, W. Schmidt, [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-347","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/leech.caltech.edu\/cntl\/index.php?rest_route=\/wp\/v2\/pages\/347"}],"collection":[{"href":"https:\/\/leech.caltech.edu\/cntl\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/leech.caltech.edu\/cntl\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/leech.caltech.edu\/cntl\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/leech.caltech.edu\/cntl\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=347"}],"version-history":[{"count":6,"href":"https:\/\/leech.caltech.edu\/cntl\/index.php?rest_route=\/wp\/v2\/pages\/347\/revisions"}],"predecessor-version":[{"id":476,"href":"https:\/\/leech.caltech.edu\/cntl\/index.php?rest_route=\/wp\/v2\/pages\/347\/revisions\/476"}],"wp:attachment":[{"href":"https:\/\/leech.caltech.edu\/cntl\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=347"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}